In Depth Variant Analysis:  c.1796G>A (p.Cys599Tyr)

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  c.1796G>A
p.Cys599Tyr (Legacy AA No. 581)

Variant Type:  
Point
Domain:  
Serine Protease
Codon Change: 
G>A
Variant Effect: 
Missense
No. of Patients Reported: 
1
Phenotype: 
U
Allele Count *: 
-
Allele Number *: 
-
Allele Frequency *: 
-

Variant Comments & Reference:

Disrupts the Cys571-Cys599 bond in the catalytic domain of FXIa. Esteban et al 2017

Patient Information: Show



Residue Information:




  Name Type Cyclic Size Position Hydrophobicity Charge
Wild Type
Cys
-
acyclic
medium
buried
hydrophilic
neutral
Mutated
Tyr
aromatic
cyclic
large
surface
hydrophobic
neutral


Substitution Analysis:



  • Grantham Score : 194
  • PolyPhen-2 Prediction : Probably Damaging (SCORE: 1.000)
  • SIFT Prediction : Probably Damaging (SCORE: 0.00)
  • PROVEAN Prediction : Deleterious (SCORE: -9.167)

  • Structural Implications:


    Cys599 is in a region on the surface of the FXI structure that is undefined. Hence the FXI structure and its JMOL applet are not shown below.

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    Factor XI Variant Database